STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIX1LLimb and CNS expressed 1 like. (309 aa)    
Predicted Functional Partners:
FAT2
FAT atypical cadherin 2.
   
 0.863
FAT1
FAT atypical cadherin 1.
   
 0.863
C5orf22
Chromosome unknown open reading frame, human C5orf22.
   
 0.813
FAT3
FAT atypical cadherin 3.
   
 0.810
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.786
RUBCNL
Rubicon like autophagy enhancer.
   
    0.785
CLCA1
Epithelial chloride channel protein-like.
   
    0.768
MOCS3
Molybdenum cofactor synthesis 3.
   
    0.755
ENSMUNP00000007448
annotation not available
   
 0.733
ACOT11
acyl-CoA thioesterase 11.
   
    0.732
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.