STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDCA4Cell division cycle associated 4. (264 aa)    
Predicted Functional Partners:
LOC101879656
Protein phosphatase 2 regulatory subunit Bgamma.
    
   0.722
SERTAD4
SERTA domain containing 4.
      
 0.590
PPP2R2D
Protein phosphatase 2 regulatory subunit Bdelta.
    
   0.574
LOC101881192
Protein phosphatase 2 regulatory subunit Bbeta.
    
   0.557
PPP2R2A
Protein phosphatase 2 regulatory subunit Balpha.
    
   0.557
LOC101873575
Nitric oxide synthase 1 adaptor protein.
      
 0.524
ENSMUNP00000012368
annotation not available
      
 0.524
SH3RF3
SH3 domain containing ring finger 3.
    
 
 0.418
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.