STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSANTD3Myb/SANT DNA binding domain containing 3. (296 aa)    
Predicted Functional Partners:
LOC101875124
Transmembrane protein with EGF like and two follistatin like domains 1.
 
      0.861
LOC101867894
Derriere protein-like.
    
 0.522
MAD2L2
Mitotic arrest deficient 2 like 2.
    
   0.511
LOC101876523
Growth differentiation factor 15.
    
 0.480
TGFB2
Transforming growth factor beta 2.
    
 0.479
LOC101868552
Left-right determination factor 1-like.
    
 0.464
BMP6
Bone morphogenetic protein 6.
    
 0.462
BMP3
Bone morphogenetic protein 3.
    
 0.449
GDF10
Growth differentiation factor 10.
    
 0.449
LOC101881609
Bone morphogenetic protein 8A.
    
 0.446
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.