STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEPHL1Hephaestin like 1. (1150 aa)    
Predicted Functional Partners:
SLC40A1
Solute carrier family 40 member 1.
    
 0.732
FXN
Frataxin.
     
 0.725
MFGE8
Milk fat globule-EGF factor 8 protein.
 
  
 0.701
EDIL3
EGF like repeats and discoidin domains 3.
 
 
    0.684
ATP7A
ATPase copper transporting alpha.
  
 
 0.681
ATP7B
ATPase copper transporting beta.
  
 
 0.681
PROS1
Protein S.
   
 0.671
CP
Ceruloplasmin.
  
  
 
0.666
AASDH
Aminoadipate-semialdehyde dehydrogenase.
     
 0.631
PEX12
Peroxisomal biogenesis factor 12.
    
 
 0.615
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.