STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101877977Transforming acidic coiled-coil containing protein 1. (221 aa)    
Predicted Functional Partners:
TACC3
Transforming acidic coiled-coil containing protein 3.
    
 
0.666
ENSMUNP00000010681
annotation not available
    
 
 0.661
CKAP5
Cytoskeleton associated protein 5.
    
 
 0.661
CEP120
Centrosomal protein 120.
    
 0.572
ENSMUNP00000001908
annotation not available
    
 0.559
PLK3
Polo like kinase 3.
    
 0.559
PLK2
Polo like kinase 2.
    
 0.559
PLK4
Polo like kinase 4.
    
 0.559
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 
 0.547
RASL11B
RAS like family 11 member B.
    
 0.538
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.