STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101870948Gap junction beta-6 protein. (263 aa)    
Predicted Functional Partners:
GJA5
Gap junction protein alpha 5.
    
0.597
GJB1
Gap junction protein beta 1.
  
   
0.592
LOC101867873
Homeobox protein NANOG-like.
      
 0.525
ENSMUNP00000021230
annotation not available
      
 0.525
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
      
 0.520
GJA1
Gap junction protein alpha 1.
    
0.492
UCN
Urocortin.
      
 0.440
PDZD7
PDZ domain containing 7.
      
 0.440
PLCH2
Phospholipase C eta 2.
      
 0.408
ERMN
Ermin.
   
  
 0.407
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.