STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCCApropionyl-CoA carboxylase subunit alpha. (699 aa)    
Predicted Functional Partners:
PCCB
propionyl-CoA carboxylase subunit beta.
 
 0.998
MCCC2
methylcrotonoyl-CoA carboxylase 2.
 
 0.996
LOC101874192
methylcrotonoyl-CoA carboxylase beta chain, mitochondrial-like.
 
 0.965
NELFB
Negative elongation factor B-like.
   
 0.937
ENSMUNP00000004797
annotation not available
  
 0.935
DBT
Dihydrolipoamide branched chain transacylase E2.
  
 0.926
HIBADH
3-hydroxyisobutyrate dehydrogenase.
  
 0.923
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 
 0.922
MCAT
malonyl-CoA-acyl carrier protein transacylase.
  
 
 0.913
IVD
isovaleryl-CoA dehydrogenase.
  
 0.910
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.