STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKIB1Ankyrin repeat and IBR domain containing 1. (1064 aa)    
Predicted Functional Partners:
LOC101874167
Ribosomal protein S27a.
    
 0.802
LOC101869783
UEV and lactate/malate dehyrogenase domains.
   
 0.772
RNF216
Ring finger protein 216.
    
 0.768
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.748
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.747
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.684
OASL
2'-5'-oligoadenylate synthase-like protein 2.
    
 0.671
LOC101874908
Ubiquitin B.
    
 0.671
ARIH2
Ariadne RBR E3 ubiquitin protein ligase 2.
    
0.650
ENSMUNP00000020083
annotation not available
    
 0.650
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.