STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC10A2Solute carrier family 10 member 2. (365 aa)    
Predicted Functional Partners:
EFNB2
Ephrin B2.
      
 0.593
TMIGD1
Transmembrane and immunoglobulin domain containing 1.
   
  
 0.528
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
    
 0.521
FABP6
Fatty acid binding protein 6.
   
  
 0.459
EFNB1
Ephrin B1.
      
 0.440
SLC10A7
Solute carrier family 10 member 7.
      
 0.438
ENSMUNP00000014862
annotation not available
      
 0.438
TXNDC5
Thioredoxin domain containing 5.
  
  0.429
GPCPD1
Glycerophosphocholine phosphodiesterase 1.
     
 0.404
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.