STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101872596Protein phosphatase 1 regulatory subunit 12B. (186 aa)    
Predicted Functional Partners:
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
  
 0.943
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
  
 0.919
ENSMUNP00000004964
annotation not available
 
      0.900
ROCK1
Rho associated coiled-coil containing protein kinase 1.
   
 0.802
MYL1
Myosin light chain 1.
    
 0.781
ROCK2
Rho associated coiled-coil containing protein kinase 2.
   
 0.702
ENSMUNP00000018582
annotation not available
   
 0.702
LOC101881675
Myosin light chain 10.
    
 0.666
MYL2
Myosin light chain 2.
    
 0.666
CDC42
Cell division cycle 42.
  
 0.658
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.