STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DBR1Debranching RNA lariats 1. (539 aa)    
Predicted Functional Partners:
DHX38
DEAH-box helicase 38.
    
 
 0.883
CWF19L1
CWF19 like cell cycle control factor 1.
   
 
0.820
XPO5
Exportin 5.
   
  
 0.618
LOC101874396
pre-mRNA processing factor 18.
    
 
 0.571
DHX15
DEAH-box helicase 15.
    
 
 0.548
CWF19L2
CWF19 like cell cycle control factor 2.
   
  
 0.537
DROSHA
Drosha ribonuclease III.
   
  
 0.529
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
      
 0.528
TSR1
TSR1 ribosome maturation factor.
 
 
    0.527
DICER1
Dicer 1, ribonuclease III.
   
  
 0.525
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.