STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBCCD1TBCC domain containing 1. (556 aa)    
Predicted Functional Partners:
LOC101874818
Protein phosphatase 2 regulatory subunit B''beta.
    
   0.585
PPP2R3A
Protein phosphatase 2 regulatory subunit B''alpha.
    
   0.585
PPP2R3C
Protein phosphatase 2 regulatory subunit B''gamma.
    
   0.585
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
    0.575
ICMT
Isoprenylcysteine carboxyl methyltransferase.
      
 0.537
GINS1
GINS complex subunit 1.
      
 0.533
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
      
 0.531
CRTAM
Cytotoxic and regulatory T cell molecule.
      
 0.531
TLK2
Tousled like kinase 2.
      
 0.529
DNAJB6
DnaJ heat shock protein family (Hsp40) member B6.
      
 0.527
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.