STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTFTransferrin. (706 aa)    
Predicted Functional Partners:
TFRC
Transferrin receptor.
  
 0.943
CYB5R4
Cytochrome b5 reductase 4.
   
 0.794
LOC101877375
SRP receptor subunit beta.
 
      0.690
ENSMUNP00000011641
annotation not available
   
 0.681
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.681
LOC101872738
Ovalbumin-like.
   
 0.676
FOS
Fos proto-oncogene, AP-1 transcription factor subunit.
    
 
 0.615
WDR43
WD repeat domain 43.
   
 0.600
APOB
Apolipoprotein B.
  
 0.599
RPS6
Ribosomal protein S6.
   
  0.590
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.