STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMDHD1Amidohydrolase domain containing 1. (411 aa)    
Predicted Functional Partners:
HAL
Histidine ammonia-lyase.
 
 
 0.963
UROC1
Urocanate hydratase 1.
  
 
 0.956
FTCD
Formimidoyltransferase cyclodeaminase.
 
 
 0.905
LOC101880256
Adenosine deaminase tRNA specific 2.
    
 0.902
APRT
Adenine phosphoribosyltransferase.
    
 0.879
LOC101868126
ZXD family zinc finger C.
   
 
 0.877
ENSMUNP00000010345
annotation not available
  
 
 0.876
PNP
Purine nucleoside phosphorylase.
  
 
 0.870
NT5E
5'-nucleotidase ecto.
    
 0.854
UPRT
Uracil phosphoribosyltransferase homolog.
  
 
 0.833
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.