STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCGF3Polycomb group ring finger 3. (242 aa)    
Predicted Functional Partners:
RNF2
Ring finger protein 2.
    
0.956
AUTS2
Activator of transcription and developmental regulator AUTS2.
    
 0.906
RYBP
RING1 and YY1 binding protein.
    
 0.876
YAF2
YY1 associated factor 2.
    
 0.876
ENSMUNP00000004072
annotation not available
   
 0.855
KDM2B
Lysine demethylase 2B.
   
 0.855
PCGF6
Polycomb group ring finger 6.
    
0.834
CBX8
Chromobox 8.
    
 0.786
CBX4
Chromobox 4.
    
 0.769
EED
Embryonic ectoderm development.
    
 0.738
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.