STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAMR1Peptidase domain containing associated with muscle regeneration 1. (779 aa)    
Predicted Functional Partners:
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.815
ENSMUNP00000008330
annotation not available
    
 0.789
ENSMUNP00000012437
annotation not available
    
 0.733
LOC101870373
Protein tyrosine kinase 7 (inactive).
    
 0.733
WDR90
WD repeat domain 90.
    
 0.621
SNED1
Sushi, nidogen and EGF like domains 1.
    
0.523
RIPK4
Receptor interacting serine/threonine kinase 4.
    
  0.500
RNASEL
Ribonuclease L.
    
  0.500
LOC101877881
Leukocyte receptor tyrosine kinase.
    
  0.489
ALK
ALK receptor tyrosine kinase.
    
  0.489
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.