STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UPK1BUroplakin 1B. (259 aa)    
Predicted Functional Partners:
UPK3A
Uroplakin 3A.
   
 
 0.717
UPK3B
Uroplakin-3b.
   
  
 0.705
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.689
TFAP2C
Transcription factor AP-2 gamma.
      
 0.519
LOC101879398
MYCBP associated and testis expressed 1.
     
 0.475
GPM6A
Glycoprotein M6A.
   
  
 0.475
PDGFB
Platelet derived growth factor subunit B.
    
 0.444
IFNGR1
Interferon gamma receptor 1.
    
 0.441
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.