STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP47Ubiquitin specific peptidase 47. (1357 aa)    
Predicted Functional Partners:
POLB
DNA polymerase beta.
    
 0.826
TRIP12
Thyroid hormone receptor interactor 12.
   
  
 0.735
FBXW11
F-box and WD repeat domain containing 11.
    
 
 0.733
POLL
DNA polymerase lambda.
    
 0.699
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.677
ENKD1
Enkurin domain containing 1.
    
 0.640
DNTT
DNA nucleotidylexotransferase.
    
 0.640
MYSM1
Myb like, SWIRM and MPN domains 1.
   
  
 0.486
DNAJC9
DnaJ heat shock protein family (Hsp40) member C9.
      
 0.438
CEP57
Centrosomal protein 57.
      
 0.437
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.