STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPS1Transcriptional repressor GATA binding 1. (1285 aa)    
Predicted Functional Partners:
FOXA1
Forkhead box A1.
    
 0.748
SRF
Serum response factor.
    
 0.741
LOC101874478
Histone deacetylase 9.
    
 0.675
NFYB
Nuclear transcription factor Y subunit beta.
    
 
 0.675
HDAC7
Histone deacetylase 7.
    
 0.675
HDAC4
Histone deacetylase 4.
    
 0.675
HDAC10
Histone deacetylase 10.
    
 0.675
H2AZ1
Histone H2A.Z.
    
 0.666
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.659
ENSMUNP00000008330
annotation not available
    
 0.625
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.