STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDST4N-deacetylase and N-sulfotransferase 4. (864 aa)    
Predicted Functional Partners:
LOC101871544
D-glucuronyl C5-epimerase.
   
 0.806
NDST1
N-deacetylase and N-sulfotransferase 1.
  
  
 
0.776
LOC101870009
N-deacetylase and N-sulfotransferase 2.
  
 
 
0.743
NDST3
N-deacetylase and N-sulfotransferase 3.
  
  
 
0.671
SDC2
Syndecan 2.
     
 0.515
GPC3
Glypican 3.
    
 0.485
GPC5
Glypican 5.
    
 0.485
LOC101881667
Glypican-5-like.
    
 0.485
GPC4
Glypican 4.
    
 0.472
GPC6
Glypican 6.
    
 0.472
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.