STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF11BTNF receptor superfamily member 11b. (402 aa)    
Predicted Functional Partners:
TNFSF11
TNF superfamily member 11.
    
 0.995
CD40LG
CD40 ligand.
   
 0.903
TNFSF15
TNF superfamily member 15.
   
 0.878
TNFRSF11A
TNF receptor superfamily member 11a.
   
0.718
TRAF5
TNF receptor associated factor 5.
    
 0.577
TRAF7
TNF receptor associated factor 7.
    
 0.577
TRAF4
TNF receptor associated factor 4.
    
 0.577
TRAF3
TNF receptor associated factor 3.
    
 0.577
RNF41
Ring finger protein 41.
    
 0.577
TRAF6
TNF receptor associated factor 6.
    
 0.577
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.