STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC10Collectin subfamily member 10. (277 aa)    
Predicted Functional Partners:
COLEC11
Collectin subfamily member 11.
  
0.921
ENSMUNP00000021461
annotation not available
    
 0.825
COLEC12
Collectin subfamily member 12.
    
 
0.818
MASP1
Mannan binding lectin serine peptidase 1.
    
 0.783
ENSMUNP00000012300
annotation not available
    
 0.722
MARCO
Macrophage receptor with collagenous structure.
  
  0.666
C1R
Complement C1r.
    
 0.661
C1S
Complement C1s.
    
 0.661
C1QA
Complement C1q A chain.
  
 0.659
TNN
Tenascin N.
    
 0.592
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.