STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SENP7SUMO specific peptidase 7. (1047 aa)    
Predicted Functional Partners:
LOC101881654
Small ubiquitin like modifier 3.
    
 0.927
ENSMUNP00000013345
annotation not available
    
 0.927
SENP1
SUMO specific peptidase 1.
    
0.922
SUMO1
Small ubiquitin like modifier 1.
    
 0.917
SENP5
SUMO specific peptidase 5.
    
0.798
RANGAP1
Ran GTPase activating protein 1.
    
 
 0.784
TEX10
Testis expressed 10.
    
 0.759
NUP153
Nucleoporin 153.
   
 0.745
NOL9
Nucleolar protein 9.
    
 0.690
BOP1
BOP1 ribosomal biogenesis factor.
    
  0.679
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.