STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101875522Hydroxyacid oxidase 1. (328 aa)    
Predicted Functional Partners:
ENSMUNP00000006106
annotation not available
 
     0.951
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 0.936
GRHPR
Glyoxylate and hydroxypyruvate reductase.
  
 
 0.894
LDHD
Lactate dehydrogenase D.
  
 0.894
DAO
D-amino acid oxidase.
  
 
 0.873
AGXT2
Alanine--glyoxylate aminotransferase 2.
   
 
 0.870
CAT
Catalase.
   
 
 0.867
HACL1
2-hydroxyacyl-CoA lyase 1.
  
 
 0.866
HAO2
Hydroxyacid oxidase 2.
  
 
 
0.866
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1.
  
 
 0.863
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.