STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAAF5Dynein axonemal assembly factor 5. (834 aa)    
Predicted Functional Partners:
RSPH4A
Radial spoke head protein 4 homolog A.
    
 
 0.663
SUN1
Sad1 and UNC84 domain containing 1.
 
      0.632
XPO6
Exportin 6.
    
 
 0.621
LOC101868620
Dynein intermediate chain 2, axonemal.
    
 
 0.611
SPAG1
Sperm associated antigen 1.
      
 0.589
ZMYND10
Zinc finger MYND-type containing 10.
      
 0.583
CFAP300
Cilia and flagella associated protein 300.
    
 
 0.563
LOC101872089
Cilia and flagella associated protein 298.
      
 0.528
DNALI1
Dynein axonemal light intermediate chain 1.
      
 0.527
RSPH9
Radial spoke head component 9.
      
 0.527
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.