STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFB1MTranscription factor B1, mitochondrial. (347 aa)    
Predicted Functional Partners:
POLRMT
RNA polymerase mitochondrial.
   
 0.989
BYSL
Bystin like.
   
 
 0.948
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
   0.897
LOC101868210
PWP2 small subunit processome component.
   
 
 0.893
TSR1
TSR1 ribosome maturation factor.
   
 
 0.890
NOA1
Nitric oxide associated 1.
  
 
 0.887
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
  
 
 0.885
MRPS7
Mitochondrial ribosomal protein S7.
  
 
 0.878
MRPS9
Mitochondrial ribosomal protein S9.
   
 
 0.876
WDR3
WD repeat domain 3.
   
   0.869
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.