STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTRF1LMitochondrial translational release factor 1 like. (346 aa)    
Predicted Functional Partners:
MRPS7
Mitochondrial ribosomal protein S7.
 
 
 0.916
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
  
 
 0.910
HEMK1
HemK methyltransferase family member 1.
  
 
 0.900
MRPL20
Mitochondrial ribosomal protein L20.
 
 
 0.894
MRPL13
Mitochondrial ribosomal protein L13.
 
 
 0.894
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.889
MRPL17
Mitochondrial ribosomal protein L17.
  
 
 0.878
MRPS9
Mitochondrial ribosomal protein S9.
  
 
 0.871
MRPL32
Mitochondrial ribosomal protein L32.
  
 
 0.863
MRPS6
Mitochondrial ribosomal protein S6.
  
 
 0.861
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.