STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101877873TNF receptor superfamily member 8. (440 aa)    
Predicted Functional Partners:
LOC101880568
TNF receptor superfamily member 1A.
  
 0.925
TRAF1
TNF receptor associated factor 1.
   
 0.873
TRAF2
TNF receptor associated factor 2.
   
 0.873
TNFSF8
Tumor necrosis factor ligand superfamily member 8.
  
 
 0.818
TNFSF15
TNF superfamily member 15.
     
 0.770
TRAF5
TNF receptor associated factor 5.
   
 0.732
TRAF3
TNF receptor associated factor 3.
   
 0.732
TNFRSF25
TNF receptor superfamily member 25.
    
 0.723
TNFSF11
TNF superfamily member 11.
   
 
 0.645
TRAF6
TNF receptor associated factor 6.
   
 0.617
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.