URB1 protein (Melopsittacus undulatus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

URB1

URB1 ribosome biogenesis homolog. (2252 aa)

Predicted Functional Partners:

PDCD11

0.965

POLR1A

0.924

HEATR1

0.907

NAT10

0.903

UTP20

0.894

DDX24

0.870

POLR1B

0.855

CEBPZ

0.843

LOC101868210

0.838

NOC2L

0.826

Your Current Organism:

Melopsittacus undulatus

NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEBPZ	DDX24	ENSMUNP00000022414	ENSMUNP00000000341	CCAAT enhancer binding protein zeta.	DEAD-box helicase 24.	0.941
CEBPZ	HEATR1	ENSMUNP00000022414	ENSMUNP00000022341	CCAAT enhancer binding protein zeta.	HEAT repeat containing 1.	0.953
CEBPZ	LOC101868210	ENSMUNP00000022414	ENSMUNP00000011590	CCAAT enhancer binding protein zeta.	PWP2 small subunit processome component.	0.945
CEBPZ	NAT10	ENSMUNP00000022414	ENSMUNP00000019433	CCAAT enhancer binding protein zeta.	N-acetyltransferase 10.	0.931
CEBPZ	NOC2L	ENSMUNP00000022414	ENSMUNP00000020844	CCAAT enhancer binding protein zeta.	NOC2 like nucleolar associated transcriptional repressor.	0.999
CEBPZ	PDCD11	ENSMUNP00000022414	ENSMUNP00000013873	CCAAT enhancer binding protein zeta.	Programmed cell death 11.	0.999
CEBPZ	POLR1A	ENSMUNP00000022414	ENSMUNP00000001539	CCAAT enhancer binding protein zeta.	RNA polymerase I subunit A.	0.889
CEBPZ	POLR1B	ENSMUNP00000022414	ENSMUNP00000015721	CCAAT enhancer binding protein zeta.	RNA polymerase I subunit B.	0.931
CEBPZ	URB1	ENSMUNP00000022414	ENSMUNP00000007635	CCAAT enhancer binding protein zeta.	URB1 ribosome biogenesis homolog.	0.843
CEBPZ	UTP20	ENSMUNP00000022414	ENSMUNP00000007242	CCAAT enhancer binding protein zeta.	UTP20 small subunit processome component.	0.969
DDX24	CEBPZ	ENSMUNP00000000341	ENSMUNP00000022414	DEAD-box helicase 24.	CCAAT enhancer binding protein zeta.	0.941
DDX24	HEATR1	ENSMUNP00000000341	ENSMUNP00000022341	DEAD-box helicase 24.	HEAT repeat containing 1.	0.885
DDX24	LOC101868210	ENSMUNP00000000341	ENSMUNP00000011590	DEAD-box helicase 24.	PWP2 small subunit processome component.	0.928
DDX24	NAT10	ENSMUNP00000000341	ENSMUNP00000019433	DEAD-box helicase 24.	N-acetyltransferase 10.	0.874
DDX24	NOC2L	ENSMUNP00000000341	ENSMUNP00000020844	DEAD-box helicase 24.	NOC2 like nucleolar associated transcriptional repressor.	0.960
DDX24	PDCD11	ENSMUNP00000000341	ENSMUNP00000013873	DEAD-box helicase 24.	Programmed cell death 11.	0.958
DDX24	POLR1A	ENSMUNP00000000341	ENSMUNP00000001539	DEAD-box helicase 24.	RNA polymerase I subunit A.	0.639
DDX24	POLR1B	ENSMUNP00000000341	ENSMUNP00000015721	DEAD-box helicase 24.	RNA polymerase I subunit B.	0.822
DDX24	URB1	ENSMUNP00000000341	ENSMUNP00000007635	DEAD-box helicase 24.	URB1 ribosome biogenesis homolog.	0.870
DDX24	UTP20	ENSMUNP00000000341	ENSMUNP00000007242	DEAD-box helicase 24.	UTP20 small subunit processome component.	0.858