STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCZSarcoglycan zeta. (287 aa)    
Predicted Functional Partners:
PIGM
Phosphatidylinositol glycan anchor biosynthesis class M.
 
      0.633
SSPN
Sarcospan.
   
 
 0.520
LOC101868193
Hepatitis A virus cellular receptor 1 homolog.
      
 0.487
SGCE
Sarcoglycan epsilon.
   
 
 0.484
SGCA
Sarcoglycan alpha.
   
 
 0.484
DAG1
Dystroglycan 1.
    
 
 0.457
LOC106023451
Dystroglycan-like.
    
 
 0.457
LOC101873575
Nitric oxide synthase 1 adaptor protein.
      
 0.402
ENSMUNP00000012368
annotation not available
      
 0.402
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.