STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101877633Epidermal retinol dehydrogenase 2-like. (305 aa)    
Predicted Functional Partners:
ALDH1A3
Aldehyde dehydrogenase 1 family member A3.
 
 0.885
ALDH1A1
Aldehyde dehydrogenase 1 family member A1.
 
 0.873
ALDH1A2
Aldehyde dehydrogenase 1 family member A2.
 
 0.873
CD3E
CD3e molecule.
   
 0.872
CYP26A1
Cytochrome P450 26A1.
  
 
 0.862
PNPLA4
Patatin like phospholipase domain containing 4.
     
 0.839
BCO1
Beta-carotene oxygenase 1.
   
 
 0.839
CYP27C1
Cytochrome P450 27C1.
  
 
  0.838
SDR16C5
Short chain dehydrogenase/reductase family 16C member 5.
  
  
 
0.837
LRAT
Lecithin retinol acyltransferase.
  
 0.822
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.