STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATL2Atlastin GTPase 2. (598 aa)    
Predicted Functional Partners:
LOC101869783
UEV and lactate/malate dehyrogenase domains.
   
 
 0.758
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 
 0.521
SPAST
Spastin.
   
 
 0.501
RTN1
Reticulon 1.
    
 
 0.480
RTN4
Reticulon 4.
    
 
 0.480
REEP1
Receptor accessory protein 1.
    
 
 0.476
SPART
Spartin.
      
 0.445
TSG101
Tumor susceptibility 101.
     
 0.414
FITM2
Fat storage inducing transmembrane protein 2.
      
 0.400
ZFYVE27
Zinc finger FYVE-type containing 27.
    
 
 0.400
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.