STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TASP1Taspase 1. (420 aa)    
Predicted Functional Partners:
ASNS
Asparagine synthetase (glutamine-hydrolyzing).
     
 0.852
GOT2
Glutamic-oxaloacetic transaminase 2.
   
 0.796
GOT1
Glutamic-oxaloacetic transaminase 1.
   
 0.790
SGPL1
Sphingosine-1-phosphate lyase 1.
     
 0.788
LOC101874544
Succinate dehydrogenase complex flavoprotein subunit A.
    
  0.773
CTBS
Chitobiase.
    
  0.773
LOC101870214
Asparagine synthetase domain containing 1.
     
 0.699
AGMAT
Agmatinase.
  
 
 0.688
ADSS1
Adenylosuccinate synthase 1.
    
  0.683
ADSS2
Adenylosuccinate synthase 2.
    
  0.683
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.