STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PITRM1Pitrilysin metallopeptidase 1. (1033 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 
 0.947
LOC101871408
Pyruvate dehydrogenase E1 alpha 1 subunit.
   
   0.772
ATF6
Activating transcription factor 6.
   
    0.736
OTC
Ornithine carbamoyltransferase.
    
  0.716
ENSMUNP00000000874
annotation not available
    
 
 0.708
LOC101869798
Amyloid beta precursor like protein 2.
    
 
 0.708
DLD
Dihydrolipoamide dehydrogenase.
   
 
 0.701
MIPEP
Mitochondrial intermediate peptidase.
    
 
 0.664
CDCA8
Cell division cycle associated 8.
    
  0.661
PDHB
Pyruvate dehydrogenase E1 beta subunit.
   
   0.661
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.