STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BORCS6BLOC-1 related complex subunit 6. (204 aa)    
Predicted Functional Partners:
KXD1
KxDL motif containing 1.
   
 
 0.884
LOC101873379
BLOC-1 related complex subunit 8.
   
 
 0.826
BORCS5
BLOC-1 related complex subunit 5.
    
 
 0.767
LOC101880213
BLOC-1 related complex subunit 7.
    
 
 0.759
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
    
 
 0.725
SNAPIN
SNAP associated protein.
   
 
 0.710
CREBL2
cAMP responsive element binding protein like 2.
    
 
 0.613
LOC101873713
nudE neurodevelopment protein 1 like 1.
    
 
 0.521
LAMTOR3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
    
 
 0.474
SLC66A3
Solute carrier family 66 member 3.
      
 0.426
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.