STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDTC1WD and tetratricopeptide repeats 1. (691 aa)    
Predicted Functional Partners:
CUL4B
Cullin 4B.
    
 0.850
CUL4A
Cullin 4A.
    
 0.850
KMO
Kynurenine 3-monooxygenase.
     
 0.800
COPS4
COP9 signalosome subunit 4.
    
 0.797
COPS8
COP9 signalosome subunit 8.
    
 0.792
COPS5
COP9 signalosome subunit 5.
    
 0.764
DCAF7
DDB1 and CUL4 associated factor 7.
   
 
  0.756
RBX1
Ring-box 1.
    
  0.753
DDA1
DET1 and DDB1 associated 1.
    
 0.751
MDH2
Malate dehydrogenase 2.
   
 
  0.738
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.