STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101870808POM121 transmembrane nucleoporin. (826 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2.
     
 0.976
NCOA5
Nuclear receptor coactivator 5.
     
 0.830
NUP153
Nucleoporin 153.
   
 
 0.778
NUP93
Nucleoporin 93.
   
 0.734
NUP155
Nucleoporin 155.
    
  0.711
NUP50
Nucleoporin 50.
   
 
 0.695
NUP35
Nucleoporin 35.
   
 
 0.688
NUP205
Nucleoporin 205.
    
  0.683
NUP43
Nucleoporin 43.
     
 0.680
ENSMUNP00000010496
annotation not available
     
 0.678
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.