STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL7BBAF chromatin remodeling complex subunit BCL7B. (192 aa)    
Predicted Functional Partners:
SS18L1
SS18L1 subunit of BAF chromatin remodeling complex.
    
 
 0.739
SS18
SS18 subunit of BAF chromatin remodeling complex.
    
 
 0.739
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
   
 
 0.674
BRD9
Bromodomain containing 9.
   
 
 0.662
SS18L2
SS18 like 2.
    
 
 0.640
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
    
 
 0.632
PBRM1
Polybromo 1.
    
 
 0.609
ARID2
AT-rich interaction domain 2.
    
 
 0.596
DPF3
Double PHD fingers 3.
    
 
 0.589
BRD7
Bromodomain containing 7.
   
 
 0.578
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.