STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MKS1MKS transition zone complex subunit 1. (559 aa)    
Predicted Functional Partners:
LOC101867628
B9 domain containing 1.
    
 0.948
CC2D2A
Coiled-coil and C2 domain containing 2A.
    
 0.920
TCTN1
Tectonic family member 1.
    
 0.909
AHI1
Abelson helper integration site 1.
    
 0.891
TMEM67
Transmembrane protein 67.
     
 0.888
ENSMUNP00000004748
annotation not available
     
 0.871
TCTN3
Tectonic family member 3.
    
 0.844
TCTN2
Tectonic family member 2.
     
 0.819
PSMD14
Proteasome 26S subunit, non-ATPase 14.
 
      0.793
TMEM80
Transmembrane protein 80.
     
 0.784
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.