STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD9BTB domain containing 9. (647 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
    
   0.988
FAF1
Fas associated factor 1.
    
   0.960
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.908
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.900
MRPL15
Mitochondrial ribosomal protein L15.
   
   0.886
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.885
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.885
ENSMUNP00000007534
annotation not available
   
 
 0.853
MRPL22
Mitochondrial ribosomal protein L22.
   
 
 0.852
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.852
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.