STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF318Zinc finger protein 318. (2160 aa)    
Predicted Functional Partners:
LOC101878558
Serine and arginine rich splicing factor 2.
   
 0.868
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.864
CSTF3
Cleavage stimulation factor subunit 3.
  
 0.861
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.854
CSTF1
Cleavage stimulation factor subunit 1.
    
 0.821
LOC101879182
Nuclear cap binding protein subunit 2.
    
 0.814
ENSMUNP00000015593
annotation not available
    
 0.814
CLP1
Cleavage and polyadenylation factor I subunit 1.
    
 0.811
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.810
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
   
 0.808
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.