STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX13SRY-box transcription factor 13. (600 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
    
 
 0.714
CEP85
Centrosomal protein 85.
    
 
 0.693
SOX5
SRY-box transcription factor 5.
    
 
0.670
CTNNB1
Catenin beta 1.
   
 0.638
TCF7
Transcription factor 7.
     
0.635
JUP
Junction plakoglobin.
   
 0.632
LEF1
Lymphoid enhancer binding factor 1.
     
0.607
TCF7L2
Transcription factor 7 like 2.
     
0.604
SOX11
SRY-box transcription factor 11.
    
0.542
SOX6
SRY-box transcription factor 6.
    
 
0.496
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.