STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDIK1LPDLIM1 interacting kinase 1 like. (341 aa)    
Predicted Functional Partners:
LOC101880783
Beclin 1.
    
 0.918
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
    
 0.916
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.916
ATG2B
Autophagy related 2B.
   
 0.910
ATG13
Autophagy related 13.
   
 0.894
RB1CC1
RB1 inducible coiled-coil 1.
    
 0.888
ATG14
Autophagy related 14.
    
 0.838
ATG9B
Autophagy related 9B.
   
 0.836
LOC101876080
Autophagy related 9A.
   
 0.836
ATG3
Autophagy related 3.
   
 
 0.823
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.