STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FDXACB1Ferredoxin-fold anticodon binding domain containing 1. (645 aa)    
Predicted Functional Partners:
LRRC47
Leucine rich repeat containing 47.
  
 0.990
FARSB
phenylalanyl-tRNA synthetase subunit beta.
  
 0.990
SARS1
serine--tRNA ligase, cytoplasmic.
  
 
 0.922
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.921
PNPT1
Polyribonucleotide nucleotidyltransferase 1.
  
  
 0.914
APMAP
Adipocyte plasma membrane associated protein.
  
  
 0.914
ALG6
ALG6 alpha-1,3-glucosyltransferase.
   
 
  0.881
ALG3
ALG3 alpha-1,3- mannosyltransferase.
     
 0.874
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
  
 0.860
MRPS7
Mitochondrial ribosomal protein S7.
  
  
 0.847
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.