STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101878431Plasmalemma vesicle associated protein. (417 aa)    
Predicted Functional Partners:
PRPF6
pre-mRNA processing factor 6.
    
 0.890
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
  
 0.890
CDC5L
Cell division cycle 5 like.
    
 0.834
CDCA8
Cell division cycle associated 8.
  
 
 0.822
ATP5F1A
ATP synthase F1 subunit alpha.
  
 
 0.822
ATP5F1C
ATP synthase F1 subunit gamma.
  
 
 0.819
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.807
GTPBP4
GTP binding protein 4.
   
 
 0.794
LOC101873919
ATP synthase peripheral stalk subunit OSCP.
  
 
 0.793
ATP5PD
ATP synthase peripheral stalk subunit d.
   
   0.774
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.