STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101881148Biogenesis of lysosomal organelles complex 1 subunit 5. (181 aa)    
Predicted Functional Partners:
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
    
 
 0.851
LOC101868490
Eukaryotic translation elongation factor 1 epsilon 1.
 
    
 0.821
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
    
 
 0.757
BLOC1S4
Biogenesis of lysosomal organelles complex 1 subunit 4.
    
 
 0.702
SNAPIN
SNAP associated protein.
   
 
 0.676
HPS3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
      
 0.578
LOC101881858
Zinc-binding protein A33-like.
    
   0.570
RBM17
RNA binding motif protein 17.
      
 0.520
SEC22B
SEC22 homolog B, vesicle trafficking protein.
      
 0.519
ENSMUNP00000003230
annotation not available
      
 0.519
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.