STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN6Calpain 6. (644 aa)    
Predicted Functional Partners:
CAPNS2
Calpain small subunit 2.
 
 
 0.960
LOC101877242
Calpastatin.
    
 0.790
ENSMUNP00000009806
annotation not available
   
 0.639
ITSN2
Intersectin 2.
   
 
  0.634
ENSMUNP00000013996
annotation not available
    
 
 0.626
ENSMUNP00000003292
annotation not available
   
 0.609
PDCD6
Programmed cell death 6.
   
 0.609
PEF1
penta-EF-hand domain containing 1.
   
 0.609
SRI
Sorcin.
   
 0.609
SRFBP1
Serum response factor binding protein 1.
      
 0.519
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.