STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LANCL1LanC like 1. (400 aa)    
Predicted Functional Partners:
SMYD4
SET and MYND domain containing 4.
      
 0.526
ROGDI
Rogdi atypical leucine zipper.
      
 0.525
LOC101881437
Serine/threonine/tyrosine interacting like 1.
      
 0.523
ERI3
ERI1 exoribonuclease family member 3.
      
 0.522
COPS7A
COP9 signalosome subunit 7A.
      
 0.521
STXBP1
Syntaxin binding protein 1.
      
 0.461
DERA
Deoxyribose-phosphate aldolase.
    
   0.453
ACTR10
Actin related protein 10.
      
 0.438
DHRS3
Dehydrogenase/reductase 3.
      
 0.438
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.