STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101878946RNA binding motif protein 7. (262 aa)    
Predicted Functional Partners:
ZCCHC8
Zinc finger CCHC-type containing 8.
    
 
 0.987
MTREX
Mtr4 exosome RNA helicase.
    
 0.982
EXOSC8
Exosome component 8.
    
 
 0.894
EXOSC3
Exosome component 3.
    
 
 0.859
EXOSC2
Exosome component 2.
    
 
 0.783
EXOSC7
Exosome component 7.
    
 
 0.780
EXOSC4
Exosome component 4.
    
 
 0.742
DHX9
DExH-box helicase 9.
    
 0.742
RBM39
RNA binding motif protein 39.
    
0.732
RBM25
RNA binding motif protein 25.
     
 0.731
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.