STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGS1Prostaglandin-endoperoxide synthase 1. (564 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2 group IVA.
  
 
 0.921
TBXAS1
Thromboxane A synthase 1.
   
 0.906
PTGES
Prostaglandin E synthase.
     
 0.901
CYP8B1
5-beta-cholestane-3-alpha,7-alpha-diol 12-alpha-hydroxylase.
   
 0.887
PTGS2
Prostaglandin-endoperoxide synthase 2.
  
0.886
PTGES2
Prostaglandin E synthase 2.
     
 0.884
PTGES3
Prostaglandin E synthase 3.
     
 0.880
ALOX5
Arachidonate 5-lipoxygenase.
   
 0.875
HPGDS
Hematopoietic prostaglandin D synthase.
     
 0.866
PLA2G6
Phospholipase A2 group VI.
   
 0.859
Your Current Organism:
Melopsittacus undulatus
NCBI taxonomy Id: 13146
Other names: M. undulatus, Melopsittacus unduratus, budgerigar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.